Description
CLC Protein Workbench provides a wide range of advanced protein analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench. This 2 x 2 weeks of fully functional demo includes a vast amount of advanced protein sequence analyses - all analyses are integrated in one single user-friendly and intuitive software application.
Some analyses are - Integrated 3D molecular viewer - 2 types of alignments - Phylogenetics - Secondary protein structure prediction - Signal Peptide Prediction (SignalP) - Transmembrane helix prediction (TMHMM) - Motif search (known patterns) - Motif search using regular expressions - Motif search using ProSite patterns - Pattern discovery (unknown patterns) - Web based BLAST - BLAST on local databases - Batch processing of multiple analyses in one work-step - Protein family analysis (PFAM) - Dot plots - Hydrophobicity analyses - Antigenicity analyses - Searches on GenBank, Swiss-Prot, TrEMBL, and PubMed - Log of actions/analyses performed
Some analyses are - Integrated 3D molecular viewer - 2 types of alignments - Phylogenetics - Secondary protein structure prediction - Signal Peptide Prediction (SignalP) - Transmembrane helix prediction (TMHMM) - Motif search (known patterns) - Motif search using regular expressions - Motif search using ProSite patterns - Pattern discovery (unknown patterns) - Web based BLAST - BLAST on local databases - Batch processing of multiple analyses in one work-step - Protein family analysis (PFAM) - Dot plots - Hydrophobicity analyses - Antigenicity analyses - Searches on GenBank, Swiss-Prot, TrEMBL, and PubMed - Log of actions/analyses performed
